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1

Programmable assembly of pressure sensors using pattern-forming bacteria

Cao, Yangxiaolu, Feng, Yaying, Ryser, Marc D, Zhu, Kui, Herschlag, Gregory, Cao, Changyong, Marusak, Katherine, Zauscher, Stefan, You, Lingchong

Journal:

Nature Biotechnology

Year:

2017

Language:

english

File:

PDF, 3.80 MB

english, 2017

2

A unifying framework for interpreting and predicting mutualistic systems

Wu, Feilun, Lopatkin, Allison J., Needs, Daniel A., Lee, Charlotte T., Mukherjee, Sayan, You, Lingchong

Journal:

Nature Communications

Year:

2019

Language:

english

File:

PDF, 887 KB

english, 2019

3

Spatiotemporal modulation of biodiversity in a synthetic chemical-mediated ecosystem

Song, Hao, Payne, Stephen, Gray, Meagan, You, Lingchong

Journal:

Nature Chemical Biology

Year:

2009

Language:

english

File:

PDF, 551 KB

english, 2009

4

A Synthetic Biology Approach to Understanding Cellular Information Processing

Riccione, Katherine A., Smith, Robert P., Lee, Anna J., You, Lingchong

Journal:

ACS Synthetic Biology

Year:

2012

Language:

english

File:

PDF, 2.63 MB

english, 2012

5

A programmable microenvironment for cellular studies via microfluidics-generated double emulsions

Zhang, Ying, Ho, Yi-Ping, Chiu, Ya-Ling, Chan, Hon Fai, Chlebina, Ben, Schuhmann, Tom, You, Lingchong, Leong, Kam W.

Journal:

Year:

2013

Language:

english

File:

PDF, 1.48 MB

english, 2013

6

Synthetic Biology Looks Good on Paper

Lopatkin, Allison J., You, Lingchong

Journal:

Year:

2014

Language:

english

File:

PDF, 265 KB

english, 2014

7

A noisy linear map underlies oscillations in cell size and gene expression in bacteria

Tanouchi, Yu, Pai, Anand, Park, Heungwon, Huang, Shuqiang, Stamatov, Rumen, Buchler, Nicolas E., You, Lingchong

Journal:

Year:

2015

Language:

english

File:

PDF, 2.82 MB

english, 2015

8

A synthetic Escherichia coli predator–prey ecosystem

Balagaddé, Frederick K, Song, Hao, Ozaki, Jun, Collins, Cynthia H, Barnet, Matthew, Arnold, Frances H, Quake, Stephen R, You, Lingchong

Journal:

Molecular Systems Biology

Year:

2008

Language:

english

File:

PDF, 368 KB

english, 2008

9

Network calisthenics

Wong, Jeffrey V., Dong, Peng, Nevins, Joseph R., Mathey-Prevot, Bernard, You, Lingchong

Journal:

Year:

2011

Language:

english

File:

PDF, 2.35 MB

english, 2011

10

Metabolic division of labor in microbial systems

Tsoi, Ryan, Wu, Feilun, Zhang, Carolyn, Bewick, Sharon, Karig, David, You, Lingchong

Journal:

Proceedings of the National Academy of Sciences

Year:

2018

Language:

english

File:

PDF, 1.22 MB

english, 2018

11

A drift-diffusion checkpoint model predicts a highly variable and growth-factor-sensitive portion of the cell cycle G1 phase

Jones, Zack W., Leander, Rachel, Quaranta, Vito, Harris, Leonard A., Tyson, Darren R., You, Lingchong

Journal:

Year:

2018

Language:

english

File:

PDF, 10.37 MB

english, 2018

12

Author Correction: Division of labour between Myc and G1 cyclins in cell cycle commitment and pace control

Dong, Peng, Maddali, Manoj V., Srimani, Jaydeep K., Thélot, François, Nevins, Joseph R., Mathey-Prevot, Bernard, You, Lingchong

Journal:

Nature Communications

Year:

2018

Language:

english

File:

PDF, 238 KB

english, 2018

13

Biosynthetic Transition Metal Chalcogenide Semiconductor Nanoparticles: Progress in Synthesis, Property Control and Applications

Feng, Yaying, Marusak, Katherine E., You, Lingchong, Zauscher, Stefan

Journal:

Current Opinion in Colloid & Interface Science

Year:

2018

File:

PDF, 2.93 MB

2018

14

Image segmentation and dynamic lineage analysis in single-cell fluorescence microscopy

Quanli Wang, Jarad Niemi, Chee-Meng Tan, Lingchong You, Mike West

Journal:

Cytometry Part A

Year:

2010

Language:

english

File:

PDF, 744 KB

english, 2010

15

Amplification and Spread of Viruses in a Growing Plaque

LINGCHONG YOU, JOHN YIN

Journal:

Journal of Theoretical Biology

Year:

1999

Language:

english

File:

PDF, 153 KB

english, 1999

16

Patterns of Regulation from mRNA and Protein Time Series

Lingchong You, John Yin

Journal:

Metabolic Engineering

Year:

2000

Language:

english

File:

PDF, 318 KB

english, 2000

17

Engineering multicellular systems by cell–cell communication

Anand Pai, Yu Tanouchi, Cynthia H Collins, Lingchong You

Journal:

Current Opinion in Biotechnology

Year:

2009

Language:

english

File:

PDF, 507 KB

english, 2009

18

The conformational study of β-d-GlcA-(1,4)-l-Rha in solution by NMR and molecular dynamics simulations

Lingchong You, Qing Liu, Yunyu Shi, Cun-Xin Wang, Marc Lahaye, V. Tran

Journal:

Chemical Physics

Year:

1997

Language:

english

File:

PDF, 910 KB

english, 1997

19

Synthetic biology: Division of logic labour

Li, Bochong, You, Lingchong

Journal:

Year:

2011

Language:

english

File:

PDF, 291 KB

english, 2011

20

Programmed population control by cell–cell communication and regulated killing

You, Lingchong, Cox, Robert Sidney, Weiss, Ron, Arnold, Frances H.

Journal:

Year:

2004

Language:

english

File:

PDF, 225 KB

english, 2004

21

A bistable Rb–E2F switch underlies the restriction point

Yao, Guang, Lee, Tae Jun, Mori, Seiichi, Nevins, Joseph R., You, Lingchong

Journal:

Nature Cell Biology

Year:

2008

Language:

english

File:

PDF, 2.28 MB

english, 2008

22

Emergent bistability by a growth-modulating positive feedback circuit

Tan, Cheemeng, Marguet, Philippe, You, Lingchong

Journal:

Nature Chemical Biology

Year:

2009

Language:

english

File:

PDF, 567 KB

english, 2009

23

Toward computational systems biology

Journal:

Cell Biochemistry and Biophysics

Year:

2004

Language:

english

File:

PDF, 434 KB

english, 2004

24

Programming microbial population dynamics by engineered cell–cell communication

Professor Hao Song, Stephen Payne, Cheemeng Tan, Lingchong You

Journal:

Biotechnology Journal

Year:

2011

Language:

english

File:

PDF, 658 KB

english, 2011

25

Engineering microbial consortia: a new frontier in synthetic biology

Katie Brenner, Lingchong You, Frances H. Arnold

Journal:

Trends in Biotechnology

Year:

2008

Language:

english

File:

PDF, 677 KB

english, 2008

26

Response to Goldman and Brown: Making sense of microbial consortia using ecology and evolution

Katie Brenner, Lingchong You, Frances H. Arnold

Journal:

Trends in Biotechnology

Year:

2009

Language:

english

File:

PDF, 54 KB

english, 2009

27

The inoculum effect and band-pass bacterial response to periodic antibiotic treatment

Tan, Cheemeng, Phillip Smith, Robert, Srimani, Jaydeep K, Riccione, Katherine A, Prasada, Sameer, Kuehn, Meta, You, Lingchong

Journal:

Molecular Systems Biology

Year:

2012

Language:

english

File:

PDF, 1.11 MB

english, 2012

28

Signal Discrimination by Differential Regulation of Protein Stability in Quorum Sensing

Cameron Smith, Hao Song, Lingchong You

Journal:

Journal of Molecular Biology

Year:

2008

Language:

english

File:

PDF, 516 KB

english, 2008

29

Viral-Mediated Noisy Gene Expression Reveals Biphasic E2f1 Response to MYC

Jeffrey V. Wong, Guang Yao, Joseph R. Nevins, Lingchong You

Journal:

Year:

2011

Language:

english

File:

PDF, 1.22 MB

english, 2011

30

Programming stress-induced altruistic death in engineered bacteria

Tanouchi, Yu, Pai, Anand, Buchler, Nicolas E, You, Lingchong

Journal:

Molecular Systems Biology

Year:

2012

Language:

english

File:

PDF, 1.04 MB

english, 2012

31

A different life?

Chin, Jason W, You, Lingchong

Journal:

Current Opinion in Chemical Biology

Year:

2012

Language:

english

File:

PDF, 150 KB

english, 2012

32

Engineering microbial systems to explore ecological and evolutionary dynamics

Yu Tanouchi, Robert P Smith, Lingchong You

Journal:

Current Opinion in Biotechnology

Year:

2012

Language:

english

File:

PDF, 555 KB

english, 2012

33

Noise-Limited Frequency Signal Transmission in Gene Circuits

Tan, Cheemeng, Reza, Faisal, You, Lingchong

Journal:

Biophysical Journal

Year:

2007

Language:

english

File:

PDF, 377 KB

english, 2007

34

Biology by design: reduction and synthesis of cellular components and behaviour

Marguet, Philippe, Balagadde, Frederick, Tan, Cheemeng, You, Lingchong

Journal:

Journal of The Royal Society Interface

Year:

2007

Language:

english

File:

PDF, 414 KB

english, 2007

35

Programmed cell death in bacteria and implications for antibiotic therapy

Tanouchi, Yu, Lee, Anna Jisu, Meredith, Hannah, You, Lingchong

Journal:

Trends in Microbiology

Year:

2013

Language:

english

File:

PDF, 1.01 MB

english, 2013

36

A brave new synthetic world

Farren J Isaacs, Lingchong You

Journal:

Year:

2009

Language:

english

File:

PDF, 49 KB

english, 2009

37

Predictive power of cell-to-cell variability

Bochong Li, Lingchong You

Journal:

Quantitative Biology

Year:

2013

Language:

english

File:

PDF, 332 KB

english, 2013

38

Proliferation behavior of E. coli in a three-dimensional in vitro tumor model

Elliott, Nelita, Lee, Tae, You, Lingchong, Yuan, Fan

Journal:

Integrative Biology

Year:

2011

Language:

english

File:

PDF, 3.85 MB

english, 2011

39

Generic Metric to Quantify Quorum Sensing Activation Dynamics

Pai, Anand, Srimani, Jaydeep K., Tanouchi, Yu, You, Lingchong

Journal:

ACS Synthetic Biology

Year:

2014

Language:

english

File:

PDF, 1.98 MB

english, 2014

40

Evolving Sensitivity

Song, Hao, You, Lingchong

Journal:

ACS Chemical Biology

Year:

2006

Language:

english

File:

PDF, 112 KB

english, 2006

41

Stochastic Sensitivity Analysis and Kernel Inference via Distributional Data

Li, Bochong, You, Lingchong

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 1.05 MB

english, 2014

42

A Whole More Than the Sum of Its Synthetic Parts

Wong, Jeffrey V., Song, Hao, You, Lingchong

Journal:

ACS Chemical Biology

Year:

2008

Language:

english

File:

PDF, 166 KB

english, 2008

43

Promoting Collaborative Interdisciplinary Research at the Duke Center for Systems Biology

Stone, Jana E., Benfey, Philip N., You, Lingchong

Journal:

ACS Synthetic Biology

Year:

2012

Language:

english

File:

PDF, 535 KB

english, 2012

44

A synthetic biology challenge: making cells compute

Tan, Cheemeng, Song, Hao, Niemi, Jarad, You, Lingchong

Journal:

Molecular BioSystems

Year:

2007

Language:

english

File:

PDF, 588 KB

english, 2007

45

Decoding biological principles using gene circuits

Tanouchi, Yu, Pai, Anand, You, Lingchong

Journal:

Molecular BioSystems

Year:

2009

Language:

english

File:

PDF, 1.03 MB

english, 2009

46

Emergent Dynamics from Quorum Eavesdropping

Srimani, Jaydeep K., You, Lingchong

Journal:

Chemistry & Biology

Year:

2014

Language:

english

File:

PDF, 358 KB

english, 2014

47

Division of labour between Myc and G1 cyclins in cell cycle commitment and pace control

Dong, Peng, Maddali, Manoj V., Srimani, Jaydeep K., Thélot, François, Nevins, Joseph R., Mathey-Prevot, Bernard, You, Lingchong

Journal:

Nature Communications

Year:

2014

Language:

english

File:

PDF, 2.46 MB

english, 2014

48

Bayesian Learning from Marginal Data in Bionetwork Models

Bonassi, Fernando V., You, Lingchong, West, Mike

Journal:

Statistical Applications in Genetics and Molecular Biology

Year:

2011

Language:

english

File:

PDF, 15.69 MB

english, 2011

49

Collective antibiotic tolerance: mechanisms, dynamics and intervention

Meredith, Hannah R, Srimani, Jaydeep K, Lee, Anna J, Lopatkin, Allison J, You, Lingchong

Journal:

Nature Chemical Biology

Year:

2015

Language:

english

File:

PDF, 1.47 MB

english, 2015

50

Programmed Allee effect in bacteria causes a tradeoff between population spread and survival

Smith, Robert, Tan, Cheemeng, Srimani, Jaydeep K., Pai, Anand, Riccione, Katherine A., Song, Hao, You, Lingchong

Journal:

Proceedings of the National Academy of Sciences

Year:

2014

Language:

english

File:

PDF, 1.22 MB

english, 2014